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Mouse Atlas of Gene Expression Libraries grouped by SAGE Protocol
Protocol SAGE (SAGE 14 bp)
| Library Name |
Tissue Location |
Developmental Stage |
Strain |
Source Lab |
SAGE Protocol |
Tags Q99 |
Tags Q95 |
|
SM010
|
Spleen - Whole |
Theiler Stage 26 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
SAGE |
73,747 |
80,639 |
|
SM015
|
Pancreas - Whole |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
SAGE |
68,565 |
72,113 |
|
SM014
|
Pancreas - Whole |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
SAGE |
75,253 |
84,336 |
|
SM001
|
Liver - Whole |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
SAGE |
66,505 |
74,013 |
|
SM003
|
Heart - Ventricle |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
SAGE |
75,170 |
82,877 |
Protocol SAGE (LongSAGE 21 bp)
| Library Name |
Tissue Location |
Developmental Stage |
Strain |
Source Lab |
SAGE Protocol |
Tags Q99 |
Tags Q95 |
|
SM177
|
Limb - Forelimb |
Theiler Stage 23 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
79,452 |
83,381 |
|
SM172
|
Limb - Forelimb |
Theiler Stage 17 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
83,300 |
87,487 |
|
SM171
|
Uterus - Whole |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
75,695 |
80,043 |
|
SM170
|
Urogenital sinus - Mesenchyme |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
87,524 |
91,498 |
|
SM169
|
Kidney - Epithelium |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
36,764 |
39,152 |
|
SM166
|
Pituitary gland - Whole |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
47,437 |
49,642 |
|
SM165
|
Pituitary gland - Whole |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
44,335 |
46,164 |
|
SM164
|
Ovaries |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
88,599 |
92,311 |
|
SM163
|
Urogenital sinus - Epithelium |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
115,329 |
118,835 |
|
SM159
|
Small intestine - Epithelium |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
45,219 |
46,353 |
|
SM158
|
Liver - Liver bud and septum transversum |
Theiler Stage 14444 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
92,040 |
97,724 |
|
SM157
|
Embryo - Embryonic |
Theiler Stage 8 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
81,089 |
86,322 |
|
SM156
|
Large intestine - Epithelium |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
43,440 |
44,369 |
|
SM155
|
Large intestine - Epithelium |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
61,619 |
63,343 |
|
SM151
|
Small intestine - Epithelium |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
40,316 |
42,054 |
|
SM149
|
Liver - Whole |
Theiler Stage 26 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
78,816 |
86,317 |
|
SM146
|
Embryo - Extraembryonic |
Theiler Stage 8 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
72,071 |
77,567 |
|
SM145
|
Heart - Whole |
Theiler Stage 13 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
80,718 |
84,342 |
|
SM140
|
Liver - Right lobe |
12 weeks post birth |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
9,834 |
10,254 |
|
SM135
|
Lung - Mesenchyme |
Theiler Stage 19 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
96,624 |
99,197 |
|
SM134
|
Skin |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
77,326 |
81,688 |
|
SM133
|
Pituitary gland - Whole |
Theiler Stage 23 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
100,851 |
105,577 |
|
SM130
|
Lymph nodes - Mesenteric |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
72,033 |
75,571 |
|
SM129
|
Mammary glands |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
81,608 |
88,482 |
|
SM128
|
Testis - Whole |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
90,126 |
94,512 |
|
SM127
|
Lung - Epithelium |
Theiler Stage 19 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
84,605 |
88,677 |
|
SM126
|
Neural tube - Whole |
Theiler Stage 13 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
60,186 |
63,194 |
|
SM125
|
Neural tube - Anterior neuropore |
Theiler Stage 13 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
81,165 |
84,585 |
|
SM124
|
Kidney - Mesenchyme |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
86,180 |
90,457 |
|
SM120
|
Skin |
Theiler Stage 21 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
38,111 |
39,977 |
|
SM119
|
Skin |
Theiler Stage 21 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
39,957 |
41,510 |
|
SM118
|
Testis - Whole |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
95,530 |
99,955 |
|
SM117
|
Neural tube - Posterior neuropore |
Theiler Stage 13 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
74,203 |
78,376 |
|
SM116
|
Embryo - Anterior half |
Theiler Stage 11 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
95,261 |
101,572 |
|
SM114
|
Pancreas - Regenerating islets |
Post natal day 42 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
61,041 |
65,137 |
|
SM113
|
Kidney - Whole |
Theiler Stage 19 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
82,555 |
86,307 |
|
SM112
|
Endoderm - Hindgut |
Theiler Stage 13 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
83,752 |
87,464 |
|
SM108
|
Endoderm - Definitive |
Theiler Stage 12 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
82,476 |
86,801 |
|
SM107
|
Endoderm - Foregut |
Theiler Stage 13 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
78,529 |
82,360 |
|
SM106
|
Embryo - Posterior |
Theiler Stage 11 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
81,741 |
86,158 |
|
SM105
|
Branchial arch - Branchial arch 2 |
Theiler Stage 17 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
86,475 |
90,585 |
|
SM104
|
Kidney - Whole |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
657,654 |
698,724 |
|
SM103
|
Pancreas - Regenerating duct |
Post natal day 42 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
78,429 |
82,887 |
|
SM102
|
Pancreas - Pancreatic duct |
Post natal day 42 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
90,253 |
95,268 |
|
SM100
|
Liver - Right lobe |
12 weeks post birth |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
62,771 |
66,272 |
|
SM099
|
Embryo - Extraembryonic |
Theiler Stage 10 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
83,129 |
88,726 |
|
SM096
|
Large intestine - Whole |
Theiler Stage 25 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
94,939 |
100,712 |
|
SM095
|
Small intestine - Mesenchyme |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
91,722 |
95,041 |
|
SM094
|
Small intestine - Whole |
Theiler Stage 25 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
89,907 |
95,752 |
|
SM091
|
Testis - Whole |
Post natal day 36 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
85,478 |
91,148 |
|
SM090
|
Embryo - Embryonic |
Theiler Stage 10 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
84,333 |
88,875 |
|
SM089
|
Stomach - Whole |
Theiler Stage 25 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
87,268 |
92,123 |
|
SM086
|
Kidney - Whole |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
93,855 |
100,180 |
|
SM085
|
Limb - Forelimb |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
86,656 |
91,026 |
|
SM084
|
Limb - Forelimb |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
99,182 |
104,314 |
|
SM082
|
Kidney - Whole |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
96,413 |
101,647 |
|
SM080
|
Testis - Whole |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
80,563 |
86,695 |
|
SM079
|
Adrenal glands |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
71,624 |
77,156 |
|
SM078
|
Large intestine - Mesenchyme |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
80,251 |
86,078 |
|
SM076
|
Ovaries |
Post natal day 36 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
104,111 |
110,339 |
|
SM075
|
Uterus - Whole |
Post natal day 36 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
87,070 |
90,987 |
|
SM074
|
Mammary glands |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
92,438 |
95,349 |
|
SM072
|
Stomach - Whole |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
86,056 |
91,903 |
|
SM071
|
Mammary glands |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
83,444 |
88,522 |
|
SM069
|
Mammary glands |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
94,971 |
100,043 |
|
SM066
|
Lung - Whole |
Theiler Stage 26 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
115,679 |
125,011 |
|
SM065
|
Urogenital sinus - Epithelium |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
116,931 |
124,167 |
|
SM063
|
Placenta - Ectoplacental cone |
Theiler Stage 10 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
84,796 |
88,982 |
|
SM062
|
Mammary glands |
Post natal day 60 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
109,966 |
116,360 |
|
SM060
|
Brain - Visual cortex |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
LongSAGE |
98,637 |
103,974 |
|
SM059
|
Adrenal glands |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
109,295 |
116,017 |
|
SM057
|
Thymus - Whole |
Theiler Stage 23 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
88,970 |
95,363 |
|
SM056
|
Brain - Optic cup |
Theiler Stage 17 |
C57BL/6J |
CMMT: Elizabeth Simpson |
LongSAGE |
111,966 |
117,231 |
|
SM055
|
Spleen - Whole |
Theiler Stage 23 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
104,639 |
110,823 |
|
SM054
|
Urogenital sinus - Whole |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
93,372 |
99,204 |
|
SM051
|
Heart - Ventricle |
Theiler Stage 19 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
109,689 |
115,264 |
|
SM050
|
Brain - Visual cortex |
Post natal day 42 |
C57BL/6J |
CMMT: Elizabeth Simpson |
LongSAGE |
89,449 |
93,150 |
|
SM049
|
Placenta - Whole |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
117,853 |
125,209 |
|
SM047
|
Placenta - Whole |
Theiler Stage 15 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
112,400 |
118,313 |
|
SM045
|
Lung - Whole |
Theiler Stage 25 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
106,098 |
113,101 |
|
SM044
|
Testis - Whole |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
104,806 |
110,547 |
|
SM043
|
Branchial arch - Branchial arch 1 |
Theiler Stage 15 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
79,553 |
82,499 |
|
SM042
|
Muscle - Skeletal-gastrocnemius |
Theiler Stage 25 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
107,009 |
115,712 |
|
SM041
|
Bladder - Whole |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
122,198 |
129,165 |
|
SM039
|
Branchial arch - Branchial arch 1 |
Theiler Stage 17 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
109,349 |
117,024 |
|
SM037
|
Bladder - Whole |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
113,238 |
121,165 |
|
SM036
|
Urogenital sinus - Mesenchyme |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
96,112 |
104,141 |
|
SM021
|
Lung - Whole |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
99,416 |
106,501 |
|
SM018
|
Lung - Whole |
Theiler Stage 19 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
93,907 |
100,658 |
|
SM212
|
Lung - Whole |
109 days post birth |
C57BL/6NTac |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
94,092 |
97,993 |
|
SM025
|
Prostate - Whole |
Theiler Stage 27 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
61,526 |
67,117 |
|
SM031
|
Brain - Visual cortex |
Post natal day 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
LongSAGE |
102,711 |
110,971 |
|
SM029
|
Brain - Visual cortex |
Post natal day 27 |
C57BL/6J |
CMMT: Elizabeth Simpson |
LongSAGE |
83,830 |
89,497 |
|
SM032
|
Urogenital sinus - Whole |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
84,647 |
90,628 |
|
SM022
|
Thymus - Whole |
Theiler Stage 26 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
57,565 |
64,730 |
|
SM012
|
Spleen - Whole |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
58,929 |
61,968 |
|
SM011
|
Spleen - Whole |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
39,558 |
41,975 |
|
SM016
|
Pancreas - Whole |
Theiler Stage 26 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
53,233 |
56,048 |
|
SM008
|
Heart - Atrioventricular canal |
Theiler Stage 19 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
66,768 |
74,276 |
|
SM007
|
Heart - Left ventricle |
Theiler Stage 14 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
65,321 |
73,865 |
|
SM006
|
Heart - Atria |
Theiler Stage 14 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
58,857 |
65,702 |
|
SM005
|
Heart - Bulbus cordis |
Theiler Stage 14 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
77,222 |
81,812 |
|
SM004
|
Heart - Atria |
Theiler Stage 19 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
60,695 |
66,817 |
|
SM002
|
Heart - Atria |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
49,927 |
55,216 |
|
SM027
|
Bladder - Whole |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
59,384 |
63,061 |
|
SM024
|
Thymus - Whole |
Post natal day 72 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
98,292 |
105,406 |
|
SM017
|
Pancreas - Islets |
Post natal day 70 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
38,269 |
40,755 |
|
SM026
|
Prostate - Dorsal lobe |
Post natal day 72 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
68,441 |
73,932 |
|
SM401
|
Embryonic stem cells - Whole |
Embronyonic Stem Cell |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
36,333 |
37,830 |
|
SM302
|
Embryonic stem cells - Whole |
Embronyonic Stem Cell |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
29,131 |
30,356 |
|
SM224
|
Pancreas - Whole |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
71,380 |
73,970 |
|
SM223
|
Pancreas - Whole |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
58,997 |
61,035 |
|
SM222
|
Lymph nodes - Lumbar |
Post natal day 63 |
Mixed |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
79,516 |
83,004 |
|
SM221
|
Lymph nodes - Lumbar |
Post natal day 63 |
Mixed |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
88,646 |
91,999 |
|
SM220
|
Prostate - Dorsal lobe |
Post natal day 63 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
44,195 |
46,184 |
|
SM219
|
Prostate - Dorsal lobe |
Post natal day 63 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
78,094 |
80,957 |
|
SM218
|
Bone |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
46,436 |
50,219 |
|
SM214
|
Skin |
12 weeks post birth |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
LongSAGE |
87,546 |
91,183 |
|
SM210
|
Esophagus - Whole |
Theiler Stage 24 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
79,493 |
82,627 |
|
SM209
|
Esophagus - Whole |
Theiler Stage 20 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
80,419 |
83,544 |
|
SM206
|
Heart - Atrioventricular canal |
Theiler Stage 15 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
81,266 |
84,545 |
|
SM203
|
Embryo - Whole |
Theiler Stage 7 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
25,727 |
26,650 |
|
SM202
|
Pituitary gland - Whole |
12 weeks post birth |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
LongSAGE |
65,725 |
69,146 |
Protocol SAGELite (LongSAGE 21 bp)
| Library Name |
Tissue Location |
Developmental Stage |
Strain |
Source Lab |
SAGE Protocol |
Tags Q99 |
Tags Q95 |
|
SM191
|
Brain - Striatum |
Post natal day 35 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
73,958 |
77,199 |
|
SM190
|
Brain - Amygdala, central nucleus |
Post natal day 35 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
63,332 |
68,197 |
|
SM189
|
Brain - Amygdala |
Post natal day 7 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
74,291 |
80,887 |
|
SM188
|
Brain - Striatum |
Post natal day 7 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,524 |
81,039 |
|
SM187
|
Brain - Dentate gyrus, dorsal/anterior |
Post natal day 35 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
75,400 |
78,381 |
|
SM186
|
Brain - CA1, dorsal/anterior |
Post natal day 35 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
74,887 |
78,388 |
|
SM185
|
Brain - CA1, dorsal/anterior |
Post natal day 7 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,996 |
81,454 |
|
SM184
|
Brain - CA1, dorsal/anterior |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
90,458 |
94,391 |
|
SM183
|
Brain - Primary motor cortex |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,165 |
82,563 |
|
SM182
|
Brain - Cerebellum white matter |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
64,213 |
67,333 |
|
SM181
|
Brain - Rahpe nuclei |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
79,509 |
85,075 |
|
SM180
|
Brain - Locus coeruleus |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
73,434 |
77,457 |
|
SM179
|
Brain - Whole |
Theiler Stage 23 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
81,925 |
85,688 |
|
SM178
|
Brain - VZ/SVZ dorsal telencephalon |
Theiler Stage 23 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
79,981 |
85,387 |
|
SM175
|
Brain - VZ/SVZ dorsal telencephalon |
Theiler Stage 25 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
68,745 |
71,965 |
|
SM167
|
Brain - VZ/SVZ dorsal telencephalon |
Theiler Stage 21 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
80,618 |
84,450 |
|
SM162
|
Pancreas - Whole |
Theiler Stage 20 |
CBA/B6 (n=2 on B6) |
BCCRC: Cheryl Helgason Lab |
SAGELite-LongSAGE |
81,439 |
86,042 |
|
SM161
|
Pancreas - Whole |
Theiler Stage 17 |
CBA/B6 (n=2 on B6) |
BCCRC: Cheryl Helgason Lab |
SAGELite-LongSAGE |
80,697 |
85,054 |
|
SM160
|
Pancreas - Whole |
Theiler Stage 20 |
CBA/B6 (n=2 on B6) |
BCCRC: Cheryl Helgason Lab |
SAGELite-LongSAGE |
80,967 |
84,188 |
|
SM154
|
Brain - Whole |
Theiler Stage 21 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
78,297 |
83,981 |
|
SM153
|
Brain - Basal nucleus of meynert |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
92,857 |
97,518 |
|
SM152
|
Brain - Substantia nigra |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
94,060 |
98,497 |
|
SM148
|
Brain - Striatum |
Theiler Stage 25 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
91,753 |
96,332 |
|
SM147
|
Brain - Visual cortex layers II/III/IV |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
102,407 |
108,175 |
|
SM144
|
Brain - Dentate gyrus, dorsal/anterior |
Post natal day 7 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,012 |
81,502 |
|
SM143
|
Brain - Whole |
Theiler Stage 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
95,346 |
98,051 |
|
SM142
|
Brain - Preplate |
Theiler Stage 21 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
83,313 |
87,567 |
|
SM141
|
Brain - Whole |
Post natal day 7 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,044 |
81,387 |
|
SM139
|
Brain - Medial thalamus |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,495 |
82,199 |
|
SM138
|
Brain - Whole |
Post natal day 35 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
81,307 |
84,381 |
|
SM137
|
Brain - Dentate gyrus, dorsal/anterior |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
74,728 |
77,739 |
|
SM132
|
Brain - Ventral thalamus |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
78,196 |
82,437 |
|
SM131
|
Brain - Whole head |
Theiler Stage 19 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
83,040 |
87,072 |
|
SM122
|
Brain - Whole head |
Theiler Stage 15 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
84,828 |
88,523 |
|
SM121
|
Brain - Whole head |
Theiler Stage 17 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
94,076 |
99,051 |
|
SM111
|
Brain - Whole |
Theiler Stage 25 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
75,791 |
80,048 |
|
SM110
|
Brain - Hypothalamus |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
80,798 |
84,996 |
|
SM109
|
Brain - Dorsal thalamus |
Theiler Stage 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
88,730 |
92,862 |
|
SM098
|
Brain - Whole |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
79,635 |
84,188 |
|
SM097
|
Brain - Whole |
Post natal day 27 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
78,450 |
83,843 |
|
SM093
|
Ovaries |
Theiler Stage 22 |
C57BL/6J |
BCCRC: Cheryl Helgason Lab |
SAGELite-LongSAGE |
80,167 |
85,206 |
|
SM092
|
Brain - Epithalamus |
Theiler Stage 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
88,563 |
94,134 |
|
SM088
|
Brain - Hypothalamus |
Theiler Stage 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
100,576 |
106,323 |
|
SM087
|
Brain - Diencephalon |
Theiler Stage 19 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
85,713 |
90,099 |
|
SM083
|
Brain - Future forebrain |
Theiler Stage 13 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
90,282 |
94,702 |
|
SM081
|
Brain - Whole head |
Theiler Stage 13 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
85,312 |
89,319 |
|
SM077
|
Embryo - Fertilized eggs |
1 Cell - Theiler Stage 1 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
SAGELite-LongSAGE |
86,155 |
90,643 |
|
SM073
|
Brain - Visual cortex |
Post natal day 27 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
79,320 |
84,084 |
|
SM070
|
Brain - Whole telencephalon |
Theiler Stage 15 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
89,381 |
93,864 |
|
SM068
|
Brain - Ventral telencephalon |
Theiler Stage 17 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
72,389 |
78,789 |
|
SM067
|
Brain - Dorsal telencephalon |
Theiler Stage 17 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,035 |
81,347 |
|
SM064
|
Brain - Prestriatum |
Theiler Stage 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
124,411 |
130,721 |
|
SM061
|
Embryo - Morulae |
Morula - Theiler Stage 3 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
SAGELite-LongSAGE |
86,401 |
90,316 |
|
SM058
|
Embryo - Blastocysts |
Blastocyst - Theiler Stage 5 |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
SAGELite-LongSAGE |
68,876 |
73,663 |
|
SM053
|
Brain - VZ/SVZ dorsal telencephalon |
Theiler Stage 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
92,997 |
98,229 |
|
SM052
|
Brain - VZ/SVZ ventral telencephalon |
Theiler Stage 20 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
89,873 |
94,313 |
|
SM040
|
Brain - Visual cortex |
Post natal day 27 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
107,941 |
114,280 |
|
SM225
|
Pancreas - Whole |
Theiler Stage 21 |
CBA/B6 (n=2 on B6) |
BCCRC: Cheryl Helgason Lab |
SAGELite-LongSAGE |
63,341 |
66,354 |
|
SM201
|
Brain - Ependymal and subependymal layers |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
83,026 |
86,730 |
|
SM208
|
Embryonic stem cells - Whole |
Embronyonic Stem Cell |
C57BL/6J |
BCCRC: Pamela Hoodless Lab |
SAGELite-LongSAGE |
65,058 |
68,257 |
|
SM196
|
Brain - Cerebellum, purkinje cell layer |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
77,296 |
81,434 |
|
SM195
|
Brain - Striatum |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
69,791 |
73,276 |
|
SM194
|
Brain - Amygdala, central nucleus |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
74,109 |
77,758 |
|
SM193
|
Brain - Amygdala, basolateral complex |
12 weeks post birth |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
76,009 |
80,622 |
|
SM192
|
Brain - Amygdala, basolateral complex |
Post natal day 35 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
70,390 |
74,010 |
|
SM301
|
Brain - VZ/SVZ dorsal telencephalon |
Theiler Stage 23 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
79,038 |
82,693 |
|
SM168
|
Brain - VZ/SVZ dorsal telencephalon |
Theiler Stage 25 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
74,278 |
77,821 |
|
SM197
|
Brain - VZ/SVZ dorsal telencephalon |
Theiler Stage 21 |
C57BL/6J |
CMMT: Elizabeth Simpson |
SAGELite-LongSAGE |
79,484 |
82,214 |
|
