SAGE Library SM212

Classification

Library Name SM212
Species Mus musculus
Strain C57BL/6NTac
Mutation Wild Type
Location Lung - Whole
Sex Male
Age P109
Developmental Stage 109 days post birth
Organsim Condition

Sample Collection

Lab BCCRC: Pamela Hoodless Lab
Number of Animals Not Available

Library Construction

SAGE Protocol SAGE (LongSAGE 21 bp)
Starting RNA 2.5 ug

Tag Extraction

Total Raw Tags (no quality cut-off) 114,611
Total Raw Tags at Q95 97,993
Total Raw Tags at Q99 94,092
Unique Tags 32,653

Data

Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM212_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM212_Q99.txt
Clustered Tag Counts and P-Value tagclustered_SM212_Q99.txt

Data Analysis

DiscoverySpace

Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.