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SAGE Library SM153

Classification

Library Name SM153
Species Mus musculus
Strain C57BL/6J
Mutation Wild Type
Location Brain - Basal nucleus of meynert
Sex Male
Age P84-P90
Developmental Stage 12 weeks post birth
Organsim Condition

Sample Collection

Tissue Dissection Photos Creative Commons License
This work is licensed under a Creative Commons Attribution 2.5 License.
Lab CMMT: Elizabeth Simpson
Number of Animals 1

Library Construction

SAGE Protocol SAGELite (LongSAGE 21 bp)
Starting RNA 38.0 ng

Tag Extraction

Total Raw Tags (no quality cut-off) 121,027
Total Raw Tags at Q95 97,518
Total Raw Tags at Q99 92,857
Unique Tags 35,858

Data

Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM153_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM153_Q99.txt
Clustered Tag Counts and P-Value tagclustered_SM153_Q99.txt

Data Analysis

DiscoverySpace

Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.