SAGE Library SM086


Library Name SM086
Species Mus musculus
Strain C57BL/6J
Mutation Wild Type
Location Kidney - Whole
Sex Unknown
Age P0
Developmental Stage Theiler Stage 27
Organsim Condition

Sample Collection

Lab BCCRC: Cheryl Helgason Lab
Number of Animals 10

Library Construction

SAGE Protocol SAGE (LongSAGE 21 bp)
Starting RNA 30.0 ug

Tag Extraction

Total Raw Tags (no quality cut-off) 129,363
Total Raw Tags at Q95 100,180
Total Raw Tags at Q99 93,855
Unique Tags 43,128


Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM086_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM086_Q99.txt
Clustered Tag Counts and P-Value tagclustered_SM086_Q99.txt

Data Analysis


Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.