SAGE Library SM079

Classification

Library Name SM079
Species Mus musculus
Strain C57BL/6J
Mutation Wild Type
Location Adrenal glands
Sex Unknown
Age E14.5
Developmental Stage Theiler Stage 22
Organsim Condition

Sample Collection

Tissue Dissection Photos

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Kidney and adrenal glands, labeled.


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Kidney and adrenal glands, unlabeled.

Creative Commons License
This work is licensed under a Creative Commons Attribution 2.5 License.
Lab BCCRC: Cheryl Helgason Lab
Number of Animals Not Available

Library Construction

SAGE Protocol SAGE (LongSAGE 21 bp)
Starting RNA 5.0 ug

Tag Extraction

Total Raw Tags (no quality cut-off) 99,949
Total Raw Tags at Q95 77,156
Total Raw Tags at Q99 71,624
Unique Tags 30,020

Data

Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM079_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM079_Q99.txt
Clustered Tag Counts and P-Value tagclustered_SM079_Q99.txt

Data Analysis

DiscoverySpace

Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.