SAGE Library SM025

Classification

Library Name SM025
Species Mus musculus
Strain C57BL/6J
Mutation Wild Type
Location Prostate - Whole
Sex Male
Age P0
Developmental Stage Theiler Stage 27
Organsim Condition

Sample Collection

Lab BCCRC: Cheryl Helgason Lab
Number of Animals 7

Library Construction

SAGE Protocol SAGE (LongSAGE 21 bp)
Starting RNA 17.1 ug

Tag Extraction

Total Raw Tags (no quality cut-off) 89,190
Total Raw Tags at Q95 67,117
Total Raw Tags at Q99 61,526
Unique Tags 32,858

Data

Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM025_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM025_Q99.txt
Clustered Tag Counts and P-Value tagclustered_SM025_Q99.txt

Data Analysis

DiscoverySpace

Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.