SAGE Library SM016


Library Name SM016
Species Mus musculus
Strain C57BL/6J
Mutation Wild Type
Location Pancreas - Whole
Sex Unknown
Age E18.5
Developmental Stage Theiler Stage 26
Organsim Condition

Sample Collection

Tissue Dissection Photos

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Pancreas in embryo, labeled.

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Pancreas in embryo, unlabeled.

Creative Commons License
This work is licensed under a Creative Commons Attribution 2.5 License.
Lab BCCRC: Cheryl Helgason Lab
Number of Animals 3

Library Construction

SAGE Protocol SAGE (LongSAGE 21 bp)
Starting RNA 10.0 ug

Tag Extraction

Total Raw Tags (no quality cut-off) 89,363
Total Raw Tags at Q95 56,048
Total Raw Tags at Q99 53,233
Unique Tags 24,071


Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM016_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM016_Q99.txt
Clustered Tag Counts and P-Value tagclustered_SM016_Q99.txt

Data Analysis


Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.