SAGE Library SM014

Classification

Library Name SM014
Species Mus musculus
Strain C57BL/6J
Mutation Wild Type
Location Pancreas - Whole
Sex Unknown
Age E14.5
Developmental Stage Theiler Stage 22
Organsim Condition

Sample Collection

Tissue Dissection Photos Creative Commons License
This work is licensed under a Creative Commons Attribution 2.5 License.
Lab BCCRC: Cheryl Helgason Lab
Number of Animals 19

Library Construction

SAGE Protocol SAGE (SAGE 14 bp)
Starting RNA 6.6 ug

Tag Extraction

Total Raw Tags (no quality cut-off) 111,602
Total Raw Tags at Q95 84,336
Total Raw Tags at Q99 75,253
Unique Tags 30,531

Data

Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM014_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM014_Q99.txt

Data Analysis

DiscoverySpace

Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.