SAGE Library SM011


Library Name SM011
Species Mus musculus
Strain C57BL/6J
Mutation Wild Type
Location Spleen - Whole
Sex Unknown
Age E16.5
Developmental Stage Theiler Stage 22
Organsim Condition

Sample Collection

Lab BCCRC: Cheryl Helgason Lab
Number of Animals 15

Library Construction

SAGE Protocol SAGE (LongSAGE 21 bp)
Starting RNA 10.0 ug

Tag Extraction

Total Raw Tags (no quality cut-off) 59,636
Total Raw Tags at Q95 41,975
Total Raw Tags at Q99 39,558
Unique Tags 19,479


Library Metadata Library Metadata XML
Tag Counts at Quality 0.95 cut-off tagcounts_SM011_Q95.txt
Tag Counts at Quality 0.99 cut-off tagcounts_SM011_Q99.txt
Clustered Tag Counts and P-Value tagclustered_SM011_Q99.txt

Data Analysis


Data is available for analysis using DiscoverySpace, a cross-platform application that allows comparison between SAGE libraries, tag to gene mapping and results from public datasources.

SAGE Library Help

A full explanation of each of the fields displayed on this page is available on the SAGE Library Help page.